3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF06037

Details:

PFam ID : PF06037

PFam Domain Description : Bacterial protein of unknown function (DUF922)

Number of Sequence in 50% Dataset : 29

Number of Sequence in Full Dataset : 64

Average sequence length: 151.7

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF06037	A0KJJ8_AERHH_29_184	96.4

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF06037	C4WIZ7_9RHIZ_54_216	100

Sequence based PCA Plot of the family - PF06037 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=19 Length=8
Motif2 Start=10 Length=8
Motif3 Start=1 Length=8
Motif4 Start=143 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay