3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF06017

Details:

PFam ID : PF06017

PFam Domain Description : Myosin tail

Number of Sequence in 50% Dataset : 107

Number of Sequence in Full Dataset : 301

Average sequence length: 184.1

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF06017	E4XCU5_OIKDI_715_931	70.7

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF06017	E4XCU5_OIKDI_715_931	100

Sequence based PCA Plot of the family - PF06017 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 2 motifs

Motif1 Start=9 Length=27
Motif2 Start=55 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay