3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF06015

Details:

PFam ID : PF06015

PFam Domain Description : Chordopoxvirus A30L protein

Number of Sequence in 50% Dataset : 5

Number of Sequence in Full Dataset : 15

Average sequence length: 64.6

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF06015	F1Z2C9_9STRE_1_34	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF06015	V194_FOWPN_7_74	100

Sequence based PCA Plot of the family - PF06015 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay