3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF06012 Details: PFam ID : PF06012 PFam Domain Description : Domain of Unknown Function (DUF908) Number of Sequence in 50% Dataset : 60 Number of Sequence in Full Dataset : 128 Average sequence length: 291.6 Pairwise Identity of Sequence in 50% Dataset : 31.3 FASSM Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF06012B6AAG7_CRYMR_102_22679.6 HMMER Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF06012E7R308_PICAD_89_436100 Sequence based PCA Plot of the family - PF06012 : BRP of Green color is by FASSM and of Red color is by HMMER PSIMOT-Motifs Extracted using PSIMOT:There are 4 motifsMotif1 Start=25 Length=8Motif2 Start=16 Length=8Motif3 Start=7 Length=8Motif4 Start=128 Length=8 Download PSSM/HMM Models/Alignment:Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay
PFam ID : PF06012
PFam Domain Description : Domain of Unknown Function (DUF908)
Number of Sequence in 50% Dataset : 60
Number of Sequence in Full Dataset : 128
Average sequence length: 291.6
Pairwise Identity of Sequence in 50% Dataset : 31.3
BRP of Green color is by FASSM and of Red color is by HMMER