3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF05961

Details:

PFam ID : PF05961

PFam Domain Description : Chordopoxvirus A13L protein

Number of Sequence in 50% Dataset : 4

Number of Sequence in Full Dataset : 12

Average sequence length: 61.9

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF05961	A1ZFR1_9BACT_2_48	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF05961	Q912N0_9POXV_1_66	100

Sequence based PCA Plot of the family - PF05961 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay