3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF05867

Details:

PFam ID : PF05867

PFam Domain Description : Caenorhabditis elegans repeat of unknown function (DUF851)

Number of Sequence in 50% Dataset : 2

Number of Sequence in Full Dataset : 4

Average sequence length: 23.7

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF05867	E7B5A6_YERE1_1_80	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF05867	Q9N4S5_CAEEL_611_641	100

Sequence based PCA Plot of the family - PF05867 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay