3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF05801

Details:

PFam ID : PF05801

PFam Domain Description : Lagovirus protein of unknown function (DUF840)

Number of Sequence in 50% Dataset : 2

Number of Sequence in Full Dataset : 5

Average sequence length: 90.6

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF05801	D2RV53_HALTV_46_187	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF05801	D2I9K3_RHDVR_1_113	100

Sequence based PCA Plot of the family - PF05801 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay