3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF05770

Details:

PFam ID : PF05770

PFam Domain Description : Inositol 1, 3, 4-trisphosphate 5/6-kinase

Number of Sequence in 50% Dataset : 67

Number of Sequence in Full Dataset : 129

Average sequence length: 239.4

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF05770	B3S0P2_TRIAD_4_182	69.6

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF05770	A1L2A0_DANRE_1_140	99.2

Sequence based PCA Plot of the family - PF05770 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=1 Length=36

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay