3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF05768

Details:

PFam ID : PF05768

PFam Domain Description : Glutaredoxin-like domain (DUF836)

Number of Sequence in 50% Dataset : 70

Number of Sequence in Full Dataset : 513

Average sequence length: 77.3

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF05768	A4S7Z3_OSTLU_34_123	89.8

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF05768	B8DZV8_DICTD_37_124	100

Sequence based PCA Plot of the family - PF05768 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=21 Length=8
Motif2 Start=12 Length=8
Motif3 Start=39 Length=8
Motif4 Start=3 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay