3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF05750

Details:

PFam ID : PF05750

PFam Domain Description : Rubella capsid protein

Number of Sequence in 50% Dataset : 2

Number of Sequence in Full Dataset : 2

Average sequence length: 150

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF05750	D5KJ87_RUBV_1_215	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF05750	POLS_RUBVV_1_300	100

Sequence based PCA Plot of the family - PF05750 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay