3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF05749

Details:

PFam ID : PF05749

PFam Domain Description : Rubella membrane glycoprotein E2

Number of Sequence in 50% Dataset : 2

Number of Sequence in Full Dataset : 2

Average sequence length: 133.5

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF05749	D5KJ87_RUBV_1_215	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF05749	E7FL31_RUBV_301_567	100

Sequence based PCA Plot of the family - PF05749 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay