3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF05734 Details: PFam ID : PF05734 PFam Domain Description : Herpesvirus protein of unknown function (DUF832) Number of Sequence in 50% Dataset : 14 Number of Sequence in Full Dataset : 17 Average sequence length: 201.7 Pairwise Identity of Sequence in 50% Dataset : 31.3 FASSM Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF05734D0U1N7_MHV68_14_243100 HMMER Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF05734Q2HR85_HHV8_1_228100 Sequence based PCA Plot of the family - PF05734 : BRP of Green color is by FASSM and of Red color is by HMMER PSIMOT-Motifs Extracted using PSIMOT:There are 4 motifsMotif1 Start=10 Length=8Motif2 Start=1 Length=8Motif3 Start=142 Length=8Motif4 Start=120 Length=8 Download PSSM/HMM Models/Alignment:Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay
PFam ID : PF05734
PFam Domain Description : Herpesvirus protein of unknown function (DUF832)
Number of Sequence in 50% Dataset : 14
Number of Sequence in Full Dataset : 17
Average sequence length: 201.7
Pairwise Identity of Sequence in 50% Dataset : 31.3
BRP of Green color is by FASSM and of Red color is by HMMER