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3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF05734
Details:

PFam ID : PF05734

PFam Domain Description : Herpesvirus protein of unknown function (DUF832)

Number of Sequence in 50% Dataset : 14

Number of Sequence in Full Dataset : 17

Average sequence length: 201.7

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:
Pfam IDBest ProfileCoverage of Best Profile
PF05734D0U1N7_MHV68_14_243100
HMMER Based Coverage Results:
Pfam IDBest ProfileCoverage of Best Profile
PF05734Q2HR85_HHV8_1_228100
Sequence based PCA Plot of the family - PF05734 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=10 Length=8
Motif2 Start=1 Length=8
Motif3 Start=142 Length=8
Motif4 Start=120 Length=8
Download PSSM/HMM Models/Alignment:
Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay