3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF05711

Details:

PFam ID : PF05711

PFam Domain Description : Macrocin-O-methyltransferase (TylF)

Number of Sequence in 50% Dataset : 100

Number of Sequence in Full Dataset : 209

Average sequence length: 198.3

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF05711	C5LCU6_9ALVE_207_340	96.9

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF05711	B3DZH9_METI4_6_274	100

Sequence based PCA Plot of the family - PF05711 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=226 Length=11
Motif2 Start=205 Length=8
Motif3 Start=100 Length=11
Motif4 Start=130 Length=11

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay