3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF05697

Details:

PFam ID : PF05697

PFam Domain Description : Bacterial trigger factor protein (TF)

Number of Sequence in 50% Dataset : 241

Number of Sequence in Full Dataset : 1165

Average sequence length: 145.0

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF05697	YCF2_HUPLU_1_241	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF05697	B3CRZ4_ORITI_2_169	100

Sequence based PCA Plot of the family - PF05697 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=10 Length=11
Motif2 Start=1 Length=8
Motif3 Start=154 Length=8
Motif4 Start=40 Length=11

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay