3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF05674

Details:

PFam ID : PF05674

PFam Domain Description : Baculovirus protein of unknown function (DUF816)

Number of Sequence in 50% Dataset : 5

Number of Sequence in Full Dataset : 35

Average sequence length: 158.6

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF05674	F1Q8Y3_DANRE_411_452	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF05674	Q0ZP45_9CBAC_12_184	94.1

Sequence based PCA Plot of the family - PF05674 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=1 Length=36

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay