3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF05555

Details:

PFam ID : PF05555

PFam Domain Description : Coxiella burnetii protein of unknown function (DUF762)

Number of Sequence in 50% Dataset : 4

Number of Sequence in Full Dataset : 4

Average sequence length: 186.5

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF05555	E5GC50_CUCME_38_56	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF05555	A9NDI2_COXBR_1_272	100

Sequence based PCA Plot of the family - PF05555 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay