3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF05497

Details:

PFam ID : PF05497

PFam Domain Description : Destabilase

Number of Sequence in 50% Dataset : 19

Number of Sequence in Full Dataset : 108

Average sequence length: 111.6

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF05497	B4HTA6_DROSE_31_90	77.7

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF05497	E0W1V9_PEDHC_24_144	100

Sequence based PCA Plot of the family - PF05497 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 2 motifs

Motif1 Start=16 Length=17
Motif2 Start=1 Length=11

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay