3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF05307

Details:

PFam ID : PF05307

PFam Domain Description : Bundlin

Number of Sequence in 50% Dataset : 8

Number of Sequence in Full Dataset : 15

Average sequence length: 74.5

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF05307	A1UD56_MYCSK_1_88	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF05307	D2TPA8_CITRI_15_112	100

Sequence based PCA Plot of the family - PF05307 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay