3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF05295

Details:

PFam ID : PF05295

PFam Domain Description : Luciferase/LBP N-terminal domain

Number of Sequence in 50% Dataset : 2

Number of Sequence in Full Dataset : 11

Average sequence length: 73.4

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF05295	SCX1_PARSC_2_25	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF05295	Q7XYY5_PYRLU_1_76	100

Sequence based PCA Plot of the family - PF05295 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay