3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF05291

Details:

PFam ID : PF05291

PFam Domain Description : Bystin

Number of Sequence in 50% Dataset : 27

Number of Sequence in Full Dataset : 159

Average sequence length: 279.7

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF05291	Q5CSR0_CRYPV_136_459	92.3

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF05291	Q5CSR0_CRYPV_136_459	100

Sequence based PCA Plot of the family - PF05291 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 3 motifs

Motif1 Start=17 Length=11
Motif2 Start=306 Length=11
Motif3 Start=271 Length=19

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay