3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF05289

Details:

PFam ID : PF05289

PFam Domain Description : Borrelia hemolysin accessory protein

Number of Sequence in 50% Dataset : 8

Number of Sequence in Full Dataset : 23

Average sequence length: 87.4

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF05289	D2HVT2_AILME_183_252	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF05289	Q9FBB2_BORHE_1_106	100

Sequence based PCA Plot of the family - PF05289 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay