3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF05187 Details: PFam ID : PF05187 PFam Domain Description : Electron transfer flavoprotein-ubiquinone oxidoreductase Number of Sequence in 50% Dataset : 21 Number of Sequence in Full Dataset : 445 Average sequence length: 108.8 Pairwise Identity of Sequence in 50% Dataset : 31.3 FASSM Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF05187A8PH18_COPC7_573_60775 HMMER Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF05187D8M5S9_BLAHO_393_507100 Sequence based PCA Plot of the family - PF05187 : BRP of Green color is by FASSM and of Red color is by HMMER PSIMOT-Motifs Extracted using PSIMOT:There are 4 motifsMotif1 Start=37 Length=8Motif2 Start=16 Length=8Motif3 Start=61 Length=8Motif4 Start=86 Length=8 Download PSSM/HMM Models/Alignment:Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay
PFam ID : PF05187
PFam Domain Description : Electron transfer flavoprotein-ubiquinone oxidoreductase
Number of Sequence in 50% Dataset : 21
Number of Sequence in Full Dataset : 445
Average sequence length: 108.8
Pairwise Identity of Sequence in 50% Dataset : 31.3
BRP of Green color is by FASSM and of Red color is by HMMER