3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF05174

Details:

PFam ID : PF05174

PFam Domain Description : Cysteine-rich D. radiodurans N terminus

Number of Sequence in 50% Dataset : 2

Number of Sequence in Full Dataset : 7

Average sequence length: 47.4

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF05174	Q6FJ27_CANGA_162_283	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF05174	Q9RV44_DEIRA_25_76	100

Sequence based PCA Plot of the family - PF05174 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay