3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF05062

Details:

PFam ID : PF05062

PFam Domain Description : RICH domain

Number of Sequence in 50% Dataset : 10

Number of Sequence in Full Dataset : 46

Average sequence length: 75

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF05062	D3IZA4_9POXV_1_336	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF05062	E0Q3Q1_9STRE_407_487	93.3

Sequence based PCA Plot of the family - PF05062 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay