3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF04972

Details:

PFam ID : PF04972

PFam Domain Description : BON domain

Number of Sequence in 50% Dataset : 444

Number of Sequence in Full Dataset : 2495

Average sequence length: 61.4

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF04972	Q47KE7_THEFY_182_225	69.9

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF04972	A4Z2T8_BRASO_161_222	98.5

Sequence based PCA Plot of the family - PF04972 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=1 Length=37

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay