3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF04837

Details:

PFam ID : PF04837

PFam Domain Description : MbeB-like, N-term conserved region

Number of Sequence in 50% Dataset : 14

Number of Sequence in Full Dataset : 25

Average sequence length: 48.6

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF04837	E3NLF3_CAERE_369_418	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF04837	A9MF65_SALAR_1_52	100

Sequence based PCA Plot of the family - PF04837 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay