3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF04798 Details: PFam ID : PF04798 PFam Domain Description : Baculovirus 19 kDa protein conserved region Number of Sequence in 50% Dataset : 9 Number of Sequence in Full Dataset : 37 Average sequence length: 137.8 Pairwise Identity of Sequence in 50% Dataset : 31.3 FASSM Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF04798Q91GG9_NPVEP_24_16912.5 HMMER Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF04798Q91GG9_NPVEP_24_169100 Sequence based PCA Plot of the family - PF04798 : BRP of Green color is by FASSM and of Red color is by HMMER PSIMOT-Motifs Extracted using PSIMOT:There are 4 motifsMotif1 Start=28 Length=8Motif2 Start=19 Length=8Motif3 Start=10 Length=8Motif4 Start=1 Length=8 Download PSSM/HMM Models/Alignment:Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay
PFam ID : PF04798
PFam Domain Description : Baculovirus 19 kDa protein conserved region
Number of Sequence in 50% Dataset : 9
Number of Sequence in Full Dataset : 37
Average sequence length: 137.8
Pairwise Identity of Sequence in 50% Dataset : 31.3
BRP of Green color is by FASSM and of Red color is by HMMER