3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF04771

Details:

PFam ID : PF04771

PFam Domain Description : Chicken anaemia virus VP-3 protein

Number of Sequence in 50% Dataset : 2

Number of Sequence in Full Dataset : 2

Average sequence length: 60.5

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF04771	A9RUF4_PHYPA_190_240	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF04771	Q45L58_9CIRC_1_121	100

Sequence based PCA Plot of the family - PF04771 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay