3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF04761

Details:

PFam ID : PF04761

PFam Domain Description : Lactococcus bacteriophage putative transcription regulator

Number of Sequence in 50% Dataset : 2

Number of Sequence in Full Dataset : 5

Average sequence length: 43

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF04761	D7G6Y0_ECTSI_369_420	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF04761	B5SP05_9CAUD_1_44	100

Sequence based PCA Plot of the family - PF04761 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay