3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF04741

Details:

PFam ID : PF04741

PFam Domain Description : InvH outer membrane lipoprotein

Number of Sequence in 50% Dataset : 4

Number of Sequence in Full Dataset : 9

Average sequence length: 105.2

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF04741	B5UNL3_BACCE_13_121	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF04741	B5NNS7_SALET_1_123	100

Sequence based PCA Plot of the family - PF04741 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay