3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF04694

Details:

PFam ID : PF04694

PFam Domain Description : Coronavirus ORF3 protein

Number of Sequence in 50% Dataset : 3

Number of Sequence in Full Dataset : 10

Average sequence length: 52.4

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF04694	Q97XV8_SULSO_1_52	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF04694	Q9QEV5_9ALPC_1_60	100

Sequence based PCA Plot of the family - PF04694 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay