3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF04671

Details:

PFam ID : PF04671

PFam Domain Description : Erythrocyte membrane-associated giant protein antigen 332

Number of Sequence in 50% Dataset : 21

Number of Sequence in Full Dataset : 33

Average sequence length: 20.4

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF04671	E7R3E0_PICAD_739_854	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF04671	Q8IHN4_PLAF7_3652_3672	90.6

Sequence based PCA Plot of the family - PF04671 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay