3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF04579 Details: PFam ID : PF04579 PFam Domain Description : Keratin, high-sulphur matrix protein Number of Sequence in 50% Dataset : 2 Number of Sequence in Full Dataset : 17 Average sequence length: 91.1 Pairwise Identity of Sequence in 50% Dataset : 31.3 FASSM Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF04579E1YLN2_9DELT_107_418No suitable BRS could be identified HMMER Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF04579D3ZGC1_RAT_4_98100 Sequence based PCA Plot of the family - PF04579 : BRP of Green color is by FASSM and of Red color is by HMMER PSIMOT-Motifs Extracted using PSIMOT:There are 4 motifsMotif1 Start=1 Length=8Motif2 Start=87 Length=8Motif3 Start=31 Length=8Motif4 Start=51 Length=8 Download PSSM/HMM Models/Alignment:Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay
PFam ID : PF04579
PFam Domain Description : Keratin, high-sulphur matrix protein
Number of Sequence in 50% Dataset : 2
Number of Sequence in Full Dataset : 17
Average sequence length: 91.1
Pairwise Identity of Sequence in 50% Dataset : 31.3
BRP of Green color is by FASSM and of Red color is by HMMER