3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF04383

Details:

PFam ID : PF04383

PFam Domain Description : KilA-N domain

Number of Sequence in 50% Dataset : 93

Number of Sequence in Full Dataset : 607

Average sequence length: 100.4

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF04383	B7WYI4_COMTE_1_67	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF04383	A2G394_TRIVA_18_88	98.3

Sequence based PCA Plot of the family - PF04383 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=21 Length=8
Motif2 Start=1 Length=8
Motif3 Start=12 Length=8
Motif4 Start=74 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay