3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF04119 Details: PFam ID : PF04119 PFam Domain Description : Heat shock protein 9/12 Number of Sequence in 50% Dataset : 5 Number of Sequence in Full Dataset : 65 Average sequence length: 56.4 Pairwise Identity of Sequence in 50% Dataset : 31.3 FASSM Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF04119Q752R7_ASHGO_159_20550 HMMER Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF04119E2LIA8_MONPE_1_5296.8 Sequence based PCA Plot of the family - PF04119 : BRP of Green color is by FASSM and of Red color is by HMMER PSIMOT-Motifs Extracted using PSIMOT:There are 2 motifsMotif1 Start=10 Length=27Motif2 Start=1 Length=8 Download PSSM/HMM Models/Alignment:Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay
PFam ID : PF04119
PFam Domain Description : Heat shock protein 9/12
Number of Sequence in 50% Dataset : 5
Number of Sequence in Full Dataset : 65
Average sequence length: 56.4
Pairwise Identity of Sequence in 50% Dataset : 31.3
BRP of Green color is by FASSM and of Red color is by HMMER