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3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF04119
Details:

PFam ID : PF04119

PFam Domain Description : Heat shock protein 9/12

Number of Sequence in 50% Dataset : 5

Number of Sequence in Full Dataset : 65

Average sequence length: 56.4

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:
Pfam IDBest ProfileCoverage of Best Profile
PF04119Q752R7_ASHGO_159_20550
HMMER Based Coverage Results:
Pfam IDBest ProfileCoverage of Best Profile
PF04119E2LIA8_MONPE_1_5296.8
Sequence based PCA Plot of the family - PF04119 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 2 motifs

Motif1 Start=10 Length=27
Motif2 Start=1 Length=8
Download PSSM/HMM Models/Alignment:
Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay