3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF04036

Details:

PFam ID : PF04036

PFam Domain Description : Domain of unknown function (DUF372)

Number of Sequence in 50% Dataset : 2

Number of Sequence in Full Dataset : 55

Average sequence length: 37.2

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF04036	B0EDN9_ENTDI_45_177	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF04036	E7QUX9_9EURY_1_30	100

Sequence based PCA Plot of the family - PF04036 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=7 Length=17

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay