3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF04029 Details: PFam ID : PF04029 PFam Domain Description : 2-phosphosulpholactate phosphatase Number of Sequence in 50% Dataset : 115 Number of Sequence in Full Dataset : 305 Average sequence length: 226.2 Pairwise Identity of Sequence in 50% Dataset : 31.3 FASSM Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF04029D2Q104_KRIFD_19_17091.2 HMMER Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF04029E8R567_ISOPI_57_328100 Sequence based PCA Plot of the family - PF04029 : BRP of Green color is by FASSM and of Red color is by HMMER PSIMOT-Motifs Extracted using PSIMOT:There are 4 motifsMotif1 Start=103 Length=8Motif2 Start=63 Length=8Motif3 Start=83 Length=8Motif4 Start=12 Length=11 Download PSSM/HMM Models/Alignment:Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay
PFam ID : PF04029
PFam Domain Description : 2-phosphosulpholactate phosphatase
Number of Sequence in 50% Dataset : 115
Number of Sequence in Full Dataset : 305
Average sequence length: 226.2
Pairwise Identity of Sequence in 50% Dataset : 31.3
BRP of Green color is by FASSM and of Red color is by HMMER