3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF03982

Details:

PFam ID : PF03982

PFam Domain Description : Diacylglycerol acyltransferase

Number of Sequence in 50% Dataset : 153

Number of Sequence in Full Dataset : 510

Average sequence length: 218.0

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF03982	A3YIP1_CAMJE_3_82	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF03982	B7QAH1_IXOSC_72_126	100

Sequence based PCA Plot of the family - PF03982 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 3 motifs

Motif1 Start=10 Length=18
Motif2 Start=1 Length=8
Motif3 Start=108 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay