3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF03866

Details:

PFam ID : PF03866

PFam Domain Description : Hydrophobic abundant protein (HAP)

Number of Sequence in 50% Dataset : 2

Number of Sequence in Full Dataset : 4

Average sequence length: 122.7

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF03866	D6KXH6_9NEIS_1_233	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF03866	HAPS_PHYPO_1_163	100

Sequence based PCA Plot of the family - PF03866 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay