3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF03827

Details:

PFam ID : PF03827

PFam Domain Description : Orexin receptor type 2

Number of Sequence in 50% Dataset : 3

Number of Sequence in Full Dataset : 5

Average sequence length: 43.4

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF03827	A6C3G0_9PLAN_14_458	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF03827	D8KWB4_ZONAL_386_443	100

Sequence based PCA Plot of the family - PF03827 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay