3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF03826

Details:

PFam ID : PF03826

PFam Domain Description : OAR domain

Number of Sequence in 50% Dataset : 28

Number of Sequence in Full Dataset : 102

Average sequence length: 20.5

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF03826	A6C3G0_9PLAN_14_458	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF03826	E0VSZ1_PEDHC_252_272	99.0

Sequence based PCA Plot of the family - PF03826 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay