3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF03819

Details:

PFam ID : PF03819

PFam Domain Description : MazG nucleotide pyrophosphohydrolase domain

Number of Sequence in 50% Dataset : 91

Number of Sequence in Full Dataset : 2171

Average sequence length: 73.1

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF03819	B8KHS2_9GAMM_1_38	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF03819	Q823L7_CHLCV_28_102	99.8

Sequence based PCA Plot of the family - PF03819 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay