3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF03811

Details:

PFam ID : PF03811

PFam Domain Description : InsA N-terminal domain

Number of Sequence in 50% Dataset : 6

Number of Sequence in Full Dataset : 110

Average sequence length: 32.4

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF03811	B0GQ93_YERPE_1_21	40

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF03811	E7JT26_SHISO_1_25	100

Sequence based PCA Plot of the family - PF03811 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=1 Length=18

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay