3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF03767

Details:

PFam ID : PF03767

PFam Domain Description : HAD superfamily, subfamily IIIB (Acid phosphatase)

Number of Sequence in 50% Dataset : 98

Number of Sequence in Full Dataset : 431

Average sequence length: 204.0

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF03767	D7TW20_VITVI_12_68	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF03767	Q3M1Y1_ANAVT_12_277	100

Sequence based PCA Plot of the family - PF03767 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=151 Length=8
Motif2 Start=19 Length=8
Motif3 Start=74 Length=8
Motif4 Start=220 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay