3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF03760

Details:

PFam ID : PF03760

PFam Domain Description : Late embryogenesis abundant (LEA) group 1

Number of Sequence in 50% Dataset : 7

Number of Sequence in Full Dataset : 55

Average sequence length: 69.0

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF03760	B9T398_RICCO_24_79	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF03760	D8QXJ5_SELML_8_80	98.1

Sequence based PCA Plot of the family - PF03760 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay