3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF03735

Details:

PFam ID : PF03735

PFam Domain Description : ENT domain

Number of Sequence in 50% Dataset : 16

Number of Sequence in Full Dataset : 92

Average sequence length: 67.4

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF03735	E7MNR1_9FIRM_122_344	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF03735	E4X3W1_OIKDI_1_75	100

Sequence based PCA Plot of the family - PF03735 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=8 Length=39

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay