3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF03728 Details: PFam ID : PF03728 PFam Domain Description : Viral DNA-binding protein, zinc binding domain Number of Sequence in 50% Dataset : 16 Number of Sequence in Full Dataset : 67 Average sequence length: 119.1 Pairwise Identity of Sequence in 50% Dataset : 31.3 FASSM Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF03728E7CH44_9ADEN_328_46453.3 HMMER Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF03728E7CH44_9ADEN_328_46451 Sequence based PCA Plot of the family - PF03728 : BRP of Green color is by FASSM and of Red color is by HMMER PSIMOT-Motifs Extracted using PSIMOT:There are 2 motifsMotif1 Start=10 Length=27Motif2 Start=1 Length=8 Download PSSM/HMM Models/Alignment:Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay
PFam ID : PF03728
PFam Domain Description : Viral DNA-binding protein, zinc binding domain
Number of Sequence in 50% Dataset : 16
Number of Sequence in Full Dataset : 67
Average sequence length: 119.1
Pairwise Identity of Sequence in 50% Dataset : 31.3
BRP of Green color is by FASSM and of Red color is by HMMER