3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF03727

Details:

PFam ID : PF03727

PFam Domain Description : Hexokinase

Number of Sequence in 50% Dataset : 110

Number of Sequence in Full Dataset : 553

Average sequence length: 211.6

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF03727	O89063_MOUSE_1_51	61.4

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF03727	B0CYV9_LACBS_226_510	100

Sequence based PCA Plot of the family - PF03727 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 2 motifs

Motif1 Start=2 Length=27
Motif2 Start=44 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay