3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF03691

Details:

PFam ID : PF03691

PFam Domain Description : Uncharacterised protein family (UPF0167)

Number of Sequence in 50% Dataset : 24

Number of Sequence in Full Dataset : 61

Average sequence length: 163.9

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF03691	A6E9N9_9SPHI_1_200	100

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF03691	C0ZJ54_BREBN_1_196	100

Sequence based PCA Plot of the family - PF03691 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=79 Length=8
Motif2 Start=3 Length=8
Motif3 Start=44 Length=8
Motif4 Start=151 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay