3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF03617

Details:

PFam ID : PF03617

PFam Domain Description : IBV 3A protein

Number of Sequence in 50% Dataset : 2

Number of Sequence in Full Dataset : 27

Average sequence length: 54.4

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF03617	A8NM27_COPC7_167_303	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF03617	A5Z194_9GAMC_1_46	100

Sequence based PCA Plot of the family - PF03617 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay